Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Gm37922-201ENSMUST00000195596 455 ntBASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.47□□□□□ -0.73
H2afb1Q9CQ70 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Gm11637-201ENSMUST00000120601 592 ntBASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Gm12091-201ENSMUST00000146791 830 ntBASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Mir339-201ENSMUST00000083659 96 ntBASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
H2afb1Q9CQ70 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb1Q9CQ70 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb1Q9CQ70 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms