Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm27741-201ENSMUST00000185060 237 ntBASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Mrpl54Q9CPW3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Gm24543-201ENSMUST00000103867 82 ntBASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Gm14760-201ENSMUST00000121831 999 ntBASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.29□□□□□ -0.6
Mrpl54Q9CPW3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mrpl54Q9CPW3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms