Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkd1Q99MH6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkd1Q99MH6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd1Q99MH6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd1Q99MH6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd1Q99MH6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd1Q99MH6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd1Q99MH6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd1Q99MH6 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Gm11978-201ENSMUST00000122315 466 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Mir7654-201ENSMUST00000185082 70 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Gm44069-201ENSMUST00000204898 506 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Gm18624-201ENSMUST00000220966 658 ntBASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkd1Q99MH6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms