Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Snord83b-201ENSMUST00000104546 94 ntBASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Gm12363-201ENSMUST00000122250 668 ntBASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Gm26927-201ENSMUST00000182385 965 ntBASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Tlr3Q99MB1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Gm10268-201ENSMUST00000085340 555 ntBASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tlr3Q99MB1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Gm27682-201ENSMUST00000183930 110 ntBASIC13.71□□□□□ -0.21
Tlr3Q99MB1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tlr3Q99MB1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.71□□□□□ -0.22
Tlr3Q99MB1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms