Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm44405-201ENSMUST00000198952 126 ntBASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm43822-201ENSMUST00000200285 476 ntBASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.3■□□□□ 0.2
Usp16Q99LG0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.3■□□□□ 0.2
Usp16Q99LG0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp16Q99LG0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Gm13875-201ENSMUST00000120162 282 ntBASIC16.29■□□□□ 0.2
Usp16Q99LG0 Gm11964-201ENSMUST00000120982 444 ntBASIC16.29■□□□□ 0.2
Usp16Q99LG0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.29■□□□□ 0.2
Usp16Q99LG0 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.29■□□□□ 0.2
Usp16Q99LG0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.29■□□□□ 0.2
Usp16Q99LG0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp16Q99LG0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.28■□□□□ 0.2
Usp16Q99LG0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Gm43758-201ENSMUST00000199500 367 ntBASIC16.28■□□□□ 0.2
Usp16Q99LG0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.28■□□□□ 0.2
Usp16Q99LG0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp16Q99LG0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.27■□□□□ 0.2
Usp16Q99LG0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.27■□□□□ 0.2
Usp16Q99LG0 Gm2546-201ENSMUST00000182630 991 ntBASIC16.27■□□□□ 0.2
Usp16Q99LG0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms