Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.89□□□□□ -0.35
Cdk9Q99J95 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cdk9Q99J95 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Gm24447-201ENSMUST00000083977 338 ntBASIC12.89□□□□□ -0.35
Cdk9Q99J95 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cdk9Q99J95 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.88□□□□□ -0.35
Cdk9Q99J95 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.88□□□□□ -0.35
Cdk9Q99J95 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.88□□□□□ -0.35
Cdk9Q99J95 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.88□□□□□ -0.35
Cdk9Q99J95 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk9Q99J95 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdk9Q99J95 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Mir6977-201ENSMUST00000184960 64 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gm38144-201ENSMUST00000192790 465 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms