Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.06■□□□□ 0
Col20a1Q923P0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col20a1Q923P0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Gm13315-201ENSMUST00000120376 991 ntBASIC15.06■□□□□ 0
Col20a1Q923P0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Col20a1Q923P0 Gm14999-201ENSMUST00000121039 624 ntBASIC15.06■□□□□ 0
Col20a1Q923P0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Gm2383-201ENSMUST00000181461 807 ntBASIC15.06■□□□□ 0
Col20a1Q923P0 AA914427-201ENSMUST00000193194 1166 ntBASIC15.06■□□□□ 0
Col20a1Q923P0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Gm8712-201ENSMUST00000221090 701 ntBASIC15.06■□□□□ 0
Col20a1Q923P0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Col20a1Q923P0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.06■□□□□ 0
Col20a1Q923P0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col20a1Q923P0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col20a1Q923P0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Col20a1Q923P0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col20a1Q923P0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Col20a1Q923P0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col20a1Q923P0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col20a1Q923P0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.05■□□□□ 0
Col20a1Q923P0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col20a1Q923P0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.05■□□□□ -0
Col20a1Q923P0 Gm13665-201ENSMUST00000120830 528 ntBASIC15.05■□□□□ -0
Col20a1Q923P0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Col20a1Q923P0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Col20a1Q923P0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.05■□□□□ -0
Col20a1Q923P0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.05■□□□□ -0
Col20a1Q923P0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.05■□□□□ -0
Col20a1Q923P0 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.05■□□□□ -0
Col20a1Q923P0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.05■□□□□ -0
Col20a1Q923P0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.05■□□□□ -0
Col20a1Q923P0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col20a1Q923P0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.05■□□□□ -0
Col20a1Q923P0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col20a1Q923P0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col20a1Q923P0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.04■□□□□ -0
Col20a1Q923P0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.04■□□□□ -0
Col20a1Q923P0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col20a1Q923P0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col20a1Q923P0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col20a1Q923P0 Gm12314-201ENSMUST00000118104 538 ntBASIC15.04■□□□□ -0
Col20a1Q923P0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.04■□□□□ -0
Col20a1Q923P0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.04■□□□□ -0
Col20a1Q923P0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.04■□□□□ -0
Col20a1Q923P0 Gm44967-201ENSMUST00000207047 631 ntBASIC15.04■□□□□ -0
Col20a1Q923P0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.04■□□□□ -0
Col20a1Q923P0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.04■□□□□ -0
Col20a1Q923P0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col20a1Q923P0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms