Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb1Q91Y08 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.27□□□□□ -0.28
Pcdhb1Q91Y08 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdhb1Q91Y08 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb1Q91Y08 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb1Q91Y08 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb1Q91Y08 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb1Q91Y08 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhb1Q91Y08 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhb1Q91Y08 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm4984-201ENSMUST00000115987 360 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm12390-201ENSMUST00000117897 397 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm16296-201ENSMUST00000159905 325 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm17150-201ENSMUST00000165577 381 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm27682-201ENSMUST00000183930 110 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm43818-201ENSMUST00000200605 466 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm26035-201ENSMUST00000083065 308 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm10268-201ENSMUST00000085340 555 ntBASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms