Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.65□□□□□ -0.38
Vsx1Q91V10 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.65□□□□□ -0.38
Vsx1Q91V10 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vsx1Q91V10 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.64□□□□□ -0.39
Vsx1Q91V10 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.64□□□□□ -0.39
Vsx1Q91V10 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm11597-201ENSMUST00000121423 964 ntBASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vsx1Q91V10 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.63□□□□□ -0.39
Vsx1Q91V10 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.63□□□□□ -0.39
Vsx1Q91V10 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm12208-201ENSMUST00000122004 163 ntBASIC12.63□□□□□ -0.39
Vsx1Q91V10 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.63□□□□□ -0.39
Vsx1Q91V10 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm8913-201ENSMUST00000209491 641 ntBASIC12.63□□□□□ -0.39
Vsx1Q91V10 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.63□□□□□ -0.39
Vsx1Q91V10 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms