Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Gm37437-201ENSMUST00000194451 1937 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 Gm43051-201ENSMUST00000201096 2678 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Tram1Q91V04 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Tram1Q91V04 Gm6415-201ENSMUST00000118488 348 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Gm12485-201ENSMUST00000119641 291 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Gm15693-201ENSMUST00000120470 637 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Gm15467-201ENSMUST00000120582 445 ntBASIC11□□□□□ -0.65
Tram1Q91V04 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Tram1Q91V04 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11□□□□□ -0.65
Tram1Q91V04 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11□□□□□ -0.65
Tram1Q91V04 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11□□□□□ -0.65
Tram1Q91V04 Mzt1-203ENSMUST00000227948 952 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Gm43075-201ENSMUST00000198613 3905 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11□□□□□ -0.65
Tram1Q91V04 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11□□□□□ -0.65
Tram1Q91V04 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tram1Q91V04 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Gm14494-201ENSMUST00000118786 435 ntBASIC10.99□□□□□ -0.65
Tram1Q91V04 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.99□□□□□ -0.65
Tram1Q91V04 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tram1Q91V04 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.99□□□□□ -0.65
Tram1Q91V04 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tram1Q91V04 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tram1Q91V04 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tram1Q91V04 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tram1Q91V04 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.98□□□□□ -0.65
Tram1Q91V04 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tram1Q91V04 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tram1Q91V04 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Tram1Q91V04 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Tram1Q91V04 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms