Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.22□□□□□ -0.29
Trim60Q8VI40 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trim60Q8VI40 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.21□□□□□ -0.29
Trim60Q8VI40 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.21□□□□□ -0.29
Trim60Q8VI40 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.21□□□□□ -0.29
Trim60Q8VI40 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim60Q8VI40 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Mir6977-201ENSMUST00000184960 64 ntBASIC13.21□□□□□ -0.29
Trim60Q8VI40 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim60Q8VI40 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.21□□□□□ -0.29
Trim60Q8VI40 Gm15823-201ENSMUST00000064305 670 ntBASIC13.21□□□□□ -0.29
Trim60Q8VI40 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim60Q8VI40 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim60Q8VI40 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim60Q8VI40 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.2□□□□□ -0.3
Trim60Q8VI40 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim60Q8VI40 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm12928-201ENSMUST00000117115 573 ntBASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm11618-201ENSMUST00000117946 267 ntBASIC13.19□□□□□ -0.3
Trim60Q8VI40 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.19□□□□□ -0.3
Trim60Q8VI40 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.19□□□□□ -0.3
Trim60Q8VI40 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm26035-201ENSMUST00000083065 308 ntBASIC13.19□□□□□ -0.3
Trim60Q8VI40 Mir339-201ENSMUST00000083659 96 ntBASIC13.19□□□□□ -0.3
Trim60Q8VI40 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.19□□□□□ -0.3
Trim60Q8VI40 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim60Q8VI40 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms