Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpap2Q8VC34 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Gm15703-201ENSMUST00000120250 880 ntBASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Gm27514-201ENSMUST00000183692 110 ntBASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Gm25857-201ENSMUST00000082788 129 ntBASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rpap2Q8VC34 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm13492-201ENSMUST00000119772 665 ntBASIC14□□□□□ -0.17
Rpap2Q8VC34 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Snora78-201ENSMUST00000158630 128 ntBASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm43438-201ENSMUST00000198133 379 ntBASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14□□□□□ -0.17
Rpap2Q8VC34 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 AC140451.2-201ENSMUST00000228030 664 ntBASIC14□□□□□ -0.17
Rpap2Q8VC34 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14□□□□□ -0.17
Rpap2Q8VC34 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rpap2Q8VC34 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Gm12502-201ENSMUST00000120197 444 ntBASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Gm7809-201ENSMUST00000153199 742 ntBASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Gm18062-201ENSMUST00000208020 547 ntBASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Gm18055-201ENSMUST00000208254 547 ntBASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rpap2Q8VC34 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms