Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Gm25732-201ENSMUST00000175168 60 ntBASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chmp7Q8R1T1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Gm6963-201ENSMUST00000147879 379 ntBASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Gm5070-201ENSMUST00000177599 862 ntBASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp7Q8R1T1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Gm12015-201ENSMUST00000117065 843 ntBASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Gm37986-201ENSMUST00000193285 383 ntBASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Gm45433-201ENSMUST00000209386 247 ntBASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms