Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Daam2-202ENSMUST00000224595 1926 ntBASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Gm38223-201ENSMUST00000194484 695 ntBASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nudcd3Q8R1N4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Mir686-201ENSMUST00000102174 109 ntBASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gm11978-201ENSMUST00000122315 466 ntBASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nudcd3Q8R1N4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nudcd3Q8R1N4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms