Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zcchc9Q8R1J3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zcchc9Q8R1J3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.79□□□□□ -0.36
Zcchc9Q8R1J3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zcchc9Q8R1J3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Zcchc9Q8R1J3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zcchc9Q8R1J3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zcchc9Q8R1J3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Gm17208-201ENSMUST00000168388 535 ntBASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zcchc9Q8R1J3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Zcchc9Q8R1J3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Gm3786-201ENSMUST00000202659 378 ntBASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.77□□□□□ -0.37
Zcchc9Q8R1J3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Zcchc9Q8R1J3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms