Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm5847-201ENSMUST00000178959 1595 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm12969-201ENSMUST00000120199 1004 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm14585-201ENSMUST00000120713 634 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm13182-201ENSMUST00000122241 312 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm27910-201ENSMUST00000185004 107 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm43692-201ENSMUST00000198236 1062 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm19931-201ENSMUST00000198920 368 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm9996-201ENSMUST00000070359 913 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ddx54Q8K4L0 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Gm11451-201ENSMUST00000118946 630 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Gm12516-201ENSMUST00000120819 385 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Gm23085-201ENSMUST00000157849 293 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Gm27530-201ENSMUST00000184096 98 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Gm19091-201ENSMUST00000208120 978 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Gm26448-201ENSMUST00000082446 203 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx54Q8K4L0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm13600-201ENSMUST00000117949 744 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm11956-201ENSMUST00000119525 512 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Mir7221-201ENSMUST00000184009 72 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm3332-201ENSMUST00000189337 928 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm17831-201ENSMUST00000205579 900 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 AC122408.1-201ENSMUST00000218949 218 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 AC166341.2-201ENSMUST00000220571 120 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms