Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col23a1Q8K4G2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col23a1Q8K4G2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col23a1Q8K4G2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 AC126799.1-201ENSMUST00000221976 246 ntBASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 AC140375.1-201ENSMUST00000225421 694 ntBASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col23a1Q8K4G2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Mir6923-201ENSMUST00000184592 72 ntBASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm9645-201ENSMUST00000197131 792 ntBASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col23a1Q8K4G2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gm9022-201ENSMUST00000182482 992 ntBASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gm5621-201ENSMUST00000187303 640 ntBASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gm28686-201ENSMUST00000187404 609 ntBASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gm9111-201ENSMUST00000219394 709 ntBASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Gm25201-201ENSMUST00000083093 170 ntBASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col23a1Q8K4G2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col23a1Q8K4G2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms