Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.06□□□□□ -0.48
Clrn1Q8K445 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.06□□□□□ -0.48
Clrn1Q8K445 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gm10268-201ENSMUST00000085340 555 ntBASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.06□□□□□ -0.48
Clrn1Q8K445 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.06□□□□□ -0.48
Clrn1Q8K445 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clrn1Q8K445 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Gm1335-201ENSMUST00000121653 386 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Gm7029-201ENSMUST00000173226 450 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Gm23363-201ENSMUST00000175024 79 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Gm4768-201ENSMUST00000206199 686 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Mir339-201ENSMUST00000083659 96 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.05□□□□□ -0.48
Clrn1Q8K445 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clrn1Q8K445 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn1Q8K445 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn1Q8K445 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Clrn1Q8K445 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.04□□□□□ -0.48
Clrn1Q8K445 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Clrn1Q8K445 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn1Q8K445 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.04□□□□□ -0.48
Clrn1Q8K445 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clrn1Q8K445 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms