Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm14704-201ENSMUST00000120300 874 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gm45384-201ENSMUST00000210451 277 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gm17794-201ENSMUST00000220252 955 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Gm23984-201ENSMUST00000157139 203 ntBASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Gm26035-201ENSMUST00000083065 308 ntBASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cchcr1Q8K2I2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm16479-201ENSMUST00000121706 932 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Mir1894-201ENSMUST00000122802 81 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm23363-201ENSMUST00000175024 79 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm37497-201ENSMUST00000195830 798 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm9908-201ENSMUST00000211534 448 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cchcr1Q8K2I2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms