Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cnot3Q8K0V4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm13453-201ENSMUST00000118708 357 ntBASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm11524-201ENSMUST00000119349 807 ntBASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm26315-201ENSMUST00000083890 321 ntBASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cnot3Q8K0V4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Gm26464-201ENSMUST00000157094 305 ntBASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Gm38294-201ENSMUST00000192831 381 ntBASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Gm19078-201ENSMUST00000206311 727 ntBASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cnot3Q8K0V4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cnot3Q8K0V4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms