Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm8810-201ENSMUST00000172895 754 ntBASIC12.89□□□□□ -0.35
Clip4Q8CI96 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.89□□□□□ -0.35
Clip4Q8CI96 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clip4Q8CI96 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.88□□□□□ -0.35
Clip4Q8CI96 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Mir7085-201ENSMUST00000184353 66 ntBASIC12.88□□□□□ -0.35
Clip4Q8CI96 Gm29127-201ENSMUST00000188304 517 ntBASIC12.88□□□□□ -0.35
Clip4Q8CI96 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.88□□□□□ -0.35
Clip4Q8CI96 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clip4Q8CI96 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.88□□□□□ -0.35
Clip4Q8CI96 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clip4Q8CI96 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.87□□□□□ -0.35
Clip4Q8CI96 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Mir874-201ENSMUST00000104769 76 ntBASIC12.87□□□□□ -0.35
Clip4Q8CI96 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.87□□□□□ -0.35
Clip4Q8CI96 Mir1982-201ENSMUST00000157368 74 ntBASIC12.87□□□□□ -0.35
Clip4Q8CI96 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.87□□□□□ -0.35
Clip4Q8CI96 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.87□□□□□ -0.35
Clip4Q8CI96 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clip4Q8CI96 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms