Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.65□□□□□ -0.38
Ccdc28bQ8CEG5 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc28bQ8CEG5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.65□□□□□ -0.39
Ccdc28bQ8CEG5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Gm14822-201ENSMUST00000122247 291 ntBASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Gm26464-201ENSMUST00000157094 305 ntBASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc28bQ8CEG5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Gm13453-201ENSMUST00000118708 357 ntBASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Gm44771-201ENSMUST00000206975 626 ntBASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Gm8396-201ENSMUST00000057361 823 ntBASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28bQ8CEG5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 BC043934-202ENSMUST00000185694 2356 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm11524-201ENSMUST00000119349 807 ntBASIC12.62□□□□□ -0.39
Ccdc28bQ8CEG5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms