Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.73□□□□□ -0.21
Vcpip1Q8CDG3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Gm7287-201ENSMUST00000205267 602 ntBASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcpip1Q8CDG3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vcpip1Q8CDG3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vcpip1Q8CDG3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vcpip1Q8CDG3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vcpip1Q8CDG3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vcpip1Q8CDG3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vcpip1Q8CDG3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Vcpip1Q8CDG3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vcpip1Q8CDG3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms