Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Gm5745-201ENSMUST00000183748 313 ntBASIC14.07□□□□□ -0.16
Trim9Q8C7M3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.07□□□□□ -0.16
Trim9Q8C7M3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm14760-201ENSMUST00000121831 999 ntBASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.06□□□□□ -0.16
Trim9Q8C7M3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm24526-201ENSMUST00000082921 158 ntBASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim9Q8C7M3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms