Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Gm1335-201ENSMUST00000121653 386 ntBASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Gm16296-201ENSMUST00000159905 325 ntBASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Gm43818-201ENSMUST00000200605 466 ntBASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trub1Q8C0D0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Gm4984-201ENSMUST00000115987 360 ntBASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.16□□□□□ -0.3
Trub1Q8C0D0 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Gm26035-201ENSMUST00000083065 308 ntBASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trub1Q8C0D0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gm38092-201ENSMUST00000195600 653 ntBASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms