Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm6415-201ENSMUST00000118488 348 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm19560-201ENSMUST00000177510 514 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm19617-201ENSMUST00000202977 308 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm43895-201ENSMUST00000203219 855 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm44712-201ENSMUST00000206250 1076 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm45098-201ENSMUST00000207179 657 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 AC139845.2-201ENSMUST00000227504 436 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 AC132863.1-201ENSMUST00000228413 751 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim35Q8C006 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.14□□□□□ -0.15
Trim35Q8C006 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim35Q8C006 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Vmn1r37-206ENSMUST00000228791 1617 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim35Q8C006 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 AC116390.1-201ENSMUST00000227975 670 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm6348-201ENSMUST00000200751 1443 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm6468-201ENSMUST00000201076 1443 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Gm6346-201ENSMUST00000201146 1443 ntBASIC14.13□□□□□ -0.15
Trim35Q8C006 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trim35Q8C006 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim35Q8C006 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms