Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.55□□□□□ -0.24
Trerf1Q8BXJ2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm5687-201ENSMUST00000118252 640 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm6447-201ENSMUST00000118905 835 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm15824-201ENSMUST00000119516 955 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm6152-201ENSMUST00000151704 340 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm27486-201ENSMUST00000184923 80 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm38671-201ENSMUST00000200573 130 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm18473-201ENSMUST00000220543 868 ntBASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trerf1Q8BXJ2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm4984-201ENSMUST00000115987 360 ntBASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm13612-201ENSMUST00000119276 390 ntBASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm11814-201ENSMUST00000119515 929 ntBASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm6266-201ENSMUST00000203844 806 ntBASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trerf1Q8BXJ2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trerf1Q8BXJ2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.52□□□□□ -0.24
Trerf1Q8BXJ2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.52□□□□□ -0.24
Trerf1Q8BXJ2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms