Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Gm38092-201ENSMUST00000195600 653 ntBASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp43Q8BUM9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp43Q8BUM9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp43Q8BUM9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp43Q8BUM9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms