Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpne3Q8BT60 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm12928-201ENSMUST00000117115 573 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm11978-201ENSMUST00000122315 466 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm18473-201ENSMUST00000220543 868 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne3Q8BT60 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Gm12091-201ENSMUST00000146791 830 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Gm45668-201ENSMUST00000211271 493 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpne3Q8BT60 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cpne3Q8BT60 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cpne3Q8BT60 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cpne3Q8BT60 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cpne3Q8BT60 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Cpne3Q8BT60 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.33□□□□□ -0.43
Cpne3Q8BT60 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cpne3Q8BT60 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne3Q8BT60 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms