Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Srrm4Q8BKA3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Gm23931-201ENSMUST00000103842 109 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Gm12957-201ENSMUST00000117835 377 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Gm26185-201ENSMUST00000157692 266 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Gm27514-201ENSMUST00000183692 110 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Snora73a-201ENSMUST00000082453 205 ntBASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Srrm4Q8BKA3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Srrm4Q8BKA3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Mir686-201ENSMUST00000102174 109 ntBASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Gm12742-201ENSMUST00000117326 410 ntBASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Gm4768-201ENSMUST00000206199 686 ntBASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 Gm19163-201ENSMUST00000223313 780 ntBASIC11.08□□□□□ -0.64
Srrm4Q8BKA3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms