Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm13829-201ENSMUST00000119600 138 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm1335-201ENSMUST00000121653 386 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm26927-201ENSMUST00000182385 965 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.69□□□□□ -0.22
Trim65Q8BFW4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim65Q8BFW4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Gm40466-201ENSMUST00000212174 422 ntBASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim65Q8BFW4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Gm14127-201ENSMUST00000117906 678 ntBASIC13.67□□□□□ -0.22
Trim65Q8BFW4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim65Q8BFW4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms