Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm14704-201ENSMUST00000120300 874 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm28975-201ENSMUST00000186412 686 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm37042-201ENSMUST00000193816 581 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.64□□□□□ -0.39
Ubp1Q811S7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ubp1Q811S7 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ubp1Q811S7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms