Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim62Q80V85 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.22□□□□□ -0.29
Trim62Q80V85 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.22□□□□□ -0.29
Trim62Q80V85 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.22□□□□□ -0.29
Trim62Q80V85 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.22□□□□□ -0.29
Trim62Q80V85 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.22□□□□□ -0.29
Trim62Q80V85 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trim62Q80V85 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim62Q80V85 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.21□□□□□ -0.29
Trim62Q80V85 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim62Q80V85 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim62Q80V85 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim62Q80V85 Mir1938-201ENSMUST00000158746 100 ntBASIC13.21□□□□□ -0.29
Trim62Q80V85 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim62Q80V85 Gm18054-201ENSMUST00000207539 555 ntBASIC13.21□□□□□ -0.29
Trim62Q80V85 Gm45925-201ENSMUST00000218882 744 ntBASIC13.21□□□□□ -0.29
Trim62Q80V85 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trim62Q80V85 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim62Q80V85 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim62Q80V85 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim62Q80V85 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim62Q80V85 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim62Q80V85 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim62Q80V85 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim62Q80V85 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim62Q80V85 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.21□□□□□ -0.3
Trim62Q80V85 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim62Q80V85 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim62Q80V85 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim62Q80V85 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Gm15703-201ENSMUST00000120250 880 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Gm11793-201ENSMUST00000120433 981 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Mospd4-201ENSMUST00000180618 576 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Gm42693-201ENSMUST00000196779 631 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Gm43630-201ENSMUST00000201550 776 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.2□□□□□ -0.3
Trim62Q80V85 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim62Q80V85 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms