Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Usp8Q80U87 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Usp8Q80U87 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp8Q80U87 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.84□□□□□ -0.35
Usp8Q80U87 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.84□□□□□ -0.35
Usp8Q80U87 Gm5687-201ENSMUST00000118252 640 ntBASIC12.84□□□□□ -0.35
Usp8Q80U87 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.84□□□□□ -0.35
Usp8Q80U87 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.84□□□□□ -0.35
Usp8Q80U87 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp8Q80U87 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp8Q80U87 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp8Q80U87 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.84□□□□□ -0.35
Usp8Q80U87 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.84□□□□□ -0.35
Usp8Q80U87 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp8Q80U87 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Usp8Q80U87 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp8Q80U87 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Usp8Q80U87 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp8Q80U87 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Usp8Q80U87 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.83□□□□□ -0.35
Usp8Q80U87 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.83□□□□□ -0.36
Usp8Q80U87 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp8Q80U87 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp8Q80U87 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.83□□□□□ -0.36
Usp8Q80U87 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.83□□□□□ -0.36
Usp8Q80U87 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.83□□□□□ -0.36
Usp8Q80U87 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usp8Q80U87 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp8Q80U87 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Gm11978-201ENSMUST00000122315 466 ntBASIC12.82□□□□□ -0.36
Usp8Q80U87 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.82□□□□□ -0.36
Usp8Q80U87 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Gm2495-201ENSMUST00000191160 466 ntBASIC12.82□□□□□ -0.36
Usp8Q80U87 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.82□□□□□ -0.36
Usp8Q80U87 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp8Q80U87 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.82□□□□□ -0.36
Usp8Q80U87 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.82□□□□□ -0.36
Usp8Q80U87 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp8Q80U87 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms