Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Gm11667-201ENSMUST00000119828 486 ntBASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Gm9996-201ENSMUST00000070359 913 ntBASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx55Q6ZPL9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Gm23251-201ENSMUST00000103773 110 ntBASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Gm10179-201ENSMUST00000086233 688 ntBASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ddx55Q6ZPL9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ddx55Q6ZPL9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Gm11941-201ENSMUST00000119904 610 ntBASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Rmrp-201ENSMUST00000157463 271 ntBASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms