Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm17208-201ENSMUST00000168388 535 ntBASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm27516-201ENSMUST00000184237 98 ntBASIC12.32□□□□□ -0.44
Sdc3Q64519 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm6013-201ENSMUST00000212264 699 ntBASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.32□□□□□ -0.44
Sdc3Q64519 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.32□□□□□ -0.44
Sdc3Q64519 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc3Q64519 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.32□□□□□ -0.44
Sdc3Q64519 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sdc3Q64519 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm15198-201ENSMUST00000117283 177 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.31□□□□□ -0.44
Sdc3Q64519 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.31□□□□□ -0.44
Sdc3Q64519 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sdc3Q64519 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sdc3Q64519 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sdc3Q64519 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sdc3Q64519 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms