Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
AtmQ62388 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.77□□□□□ -0.52
AtmQ62388 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.77□□□□□ -0.52
AtmQ62388 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
AtmQ62388 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
AtmQ62388 Gm23596-201ENSMUST00000104304 132 ntBASIC11.77□□□□□ -0.53
AtmQ62388 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
AtmQ62388 Gm24844-201ENSMUST00000158679 127 ntBASIC11.77□□□□□ -0.53
AtmQ62388 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.77□□□□□ -0.53
AtmQ62388 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.77□□□□□ -0.53
AtmQ62388 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
AtmQ62388 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.77□□□□□ -0.53
AtmQ62388 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
AtmQ62388 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
AtmQ62388 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
AtmQ62388 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
AtmQ62388 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.77□□□□□ -0.53
AtmQ62388 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.77□□□□□ -0.53
AtmQ62388 Gm6855-201ENSMUST00000206307 790 ntBASIC11.77□□□□□ -0.53
AtmQ62388 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.77□□□□□ -0.53
AtmQ62388 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.77□□□□□ -0.53
AtmQ62388 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
AtmQ62388 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
AtmQ62388 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Gm13286-201ENSMUST00000117750 537 ntBASIC11.76□□□□□ -0.53
AtmQ62388 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.76□□□□□ -0.53
AtmQ62388 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.76□□□□□ -0.53
AtmQ62388 Gm9230-201ENSMUST00000188228 532 ntBASIC11.76□□□□□ -0.53
AtmQ62388 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.76□□□□□ -0.53
AtmQ62388 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.76□□□□□ -0.53
AtmQ62388 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.76□□□□□ -0.53
AtmQ62388 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
AtmQ62388 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
AtmQ62388 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms