Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ss18Q62280 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.45□□□□□ -0.9
Ss18Q62280 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Gm29608-201ENSMUST00000190444 463 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.44□□□□□ -0.9
Ss18Q62280 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Cog3-203ENSMUST00000227473 4197 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ss18Q62280 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ss18Q62280 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 Matn2-203ENSMUST00000226766 3252 ntBASIC9.44□□□□□ -0.9
Ss18Q62280 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ss18Q62280 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.43□□□□□ -0.9
Ss18Q62280 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ss18Q62280 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.43□□□□□ -0.9
Ss18Q62280 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.43□□□□□ -0.9
Ss18Q62280 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ss18Q62280 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.43□□□□□ -0.9
Ss18Q62280 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.43□□□□□ -0.9
Ss18Q62280 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.43□□□□□ -0.9
Ss18Q62280 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Gm16215-201ENSMUST00000161990 637 ntBASIC9.43□□□□□ -0.9
Ss18Q62280 Mir6977-201ENSMUST00000184960 64 ntBASIC9.43□□□□□ -0.9
Ss18Q62280 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ss18Q62280 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.43□□□□□ -0.9
Ss18Q62280 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.43□□□□□ -0.9
Ss18Q62280 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.43□□□□□ -0.9
Ss18Q62280 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.43□□□□□ -0.9
Ss18Q62280 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.43□□□□□ -0.9
Ss18Q62280 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.43□□□□□ -0.9
Ss18Q62280 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ss18Q62280 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms