Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Trim27Q62158 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Gm3890-201ENSMUST00000182416 207 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim27Q62158 Gm18187-201ENSMUST00000196476 984 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Gm9396-201ENSMUST00000076703 567 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim27Q62158 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trim27Q62158 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.66■□□□□ 0.1
Trim27Q62158 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim27Q62158 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.65■□□□□ 0.1
Trim27Q62158 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Trim27Q62158 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim27Q62158 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim27Q62158 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim27Q62158 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim27Q62158 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim27Q62158 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim27Q62158 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trim27Q62158 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim27Q62158 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim27Q62158 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.64■□□□□ 0.09
Trim27Q62158 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim27Q62158 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim27Q62158 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.64■□□□□ 0.09
Trim27Q62158 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.64■□□□□ 0.09
Trim27Q62158 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.64■□□□□ 0.09
Trim27Q62158 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim27Q62158 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim27Q62158 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim27Q62158 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.63■□□□□ 0.09
Trim27Q62158 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim27Q62158 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trim27Q62158 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim27Q62158 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim27Q62158 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim27Q62158 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim27Q62158 Gm8738-201ENSMUST00000172606 329 ntBASIC15.63■□□□□ 0.09
Trim27Q62158 Gm27514-201ENSMUST00000183692 110 ntBASIC15.63■□□□□ 0.09
Trim27Q62158 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim27Q62158 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim27Q62158 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms