Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
VcanQ62059 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
VcanQ62059 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
VcanQ62059 Gm18514-201ENSMUST00000218980 436 ntBASIC11.66□□□□□ -0.54
VcanQ62059 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.66□□□□□ -0.54
VcanQ62059 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.66□□□□□ -0.54
VcanQ62059 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
VcanQ62059 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
VcanQ62059 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
VcanQ62059 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
VcanQ62059 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.66□□□□□ -0.54
VcanQ62059 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
VcanQ62059 Gm5805-201ENSMUST00000072779 456 ntBASIC11.66□□□□□ -0.54
VcanQ62059 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
VcanQ62059 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VcanQ62059 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.66□□□□□ -0.54
VcanQ62059 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
VcanQ62059 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Gm24844-201ENSMUST00000158679 127 ntBASIC11.65□□□□□ -0.54
VcanQ62059 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.65□□□□□ -0.54
VcanQ62059 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Gm10288-201ENSMUST00000084614 537 ntBASIC11.65□□□□□ -0.54
VcanQ62059 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
VcanQ62059 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Gm13700-201ENSMUST00000118624 1128 ntBASIC11.65□□□□□ -0.54
VcanQ62059 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.65□□□□□ -0.54
VcanQ62059 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Gm43912-201ENSMUST00000204352 538 ntBASIC11.65□□□□□ -0.54
VcanQ62059 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.65□□□□□ -0.54
VcanQ62059 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.65□□□□□ -0.54
VcanQ62059 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.65□□□□□ -0.54
VcanQ62059 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.65□□□□□ -0.54
VcanQ62059 Gm8100-201ENSMUST00000182906 988 ntBASIC11.65□□□□□ -0.54
VcanQ62059 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.65□□□□□ -0.54
VcanQ62059 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.65□□□□□ -0.54
VcanQ62059 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.65□□□□□ -0.54
VcanQ62059 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
VcanQ62059 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VcanQ62059 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
VcanQ62059 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
VcanQ62059 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
VcanQ62059 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
VcanQ62059 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
VcanQ62059 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.64□□□□□ -0.55
VcanQ62059 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.64□□□□□ -0.55
VcanQ62059 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.64□□□□□ -0.55
VcanQ62059 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
VcanQ62059 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
VcanQ62059 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.64□□□□□ -0.55
VcanQ62059 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.64□□□□□ -0.55
VcanQ62059 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.64□□□□□ -0.55
VcanQ62059 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.64□□□□□ -0.55
VcanQ62059 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.64□□□□□ -0.55
VcanQ62059 Gm26448-201ENSMUST00000082446 203 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms