Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm4986-201ENSMUST00000119731 549 ntBASIC15.09■□□□□ 0.01
Ctr9Q62018 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm6621-201ENSMUST00000193251 772 ntBASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm43758-201ENSMUST00000199500 367 ntBASIC15.09■□□□□ 0.01
Ctr9Q62018 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.09■□□□□ 0.01
Ctr9Q62018 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.09■□□□□ 0.01
Ctr9Q62018 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ctr9Q62018 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ctr9Q62018 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ctr9Q62018 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ctr9Q62018 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ctr9Q62018 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.08■□□□□ 0.01
Ctr9Q62018 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.08■□□□□ 0
Ctr9Q62018 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ctr9Q62018 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Daam2-202ENSMUST00000224595 1926 ntBASIC15.08■□□□□ 0
Ctr9Q62018 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Gm14921-201ENSMUST00000118643 908 ntBASIC15.08■□□□□ 0
Ctr9Q62018 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.08■□□□□ 0
Ctr9Q62018 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.08■□□□□ 0
Ctr9Q62018 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.08■□□□□ 0
Ctr9Q62018 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.08■□□□□ 0
Ctr9Q62018 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ctr9Q62018 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ctr9Q62018 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Gm37489-201ENSMUST00000191883 159 ntBASIC15.08■□□□□ 0
Ctr9Q62018 Gm3961-201ENSMUST00000204425 994 ntBASIC15.08■□□□□ 0
Ctr9Q62018 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.08■□□□□ 0
Ctr9Q62018 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ctr9Q62018 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.08■□□□□ 0
Ctr9Q62018 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Ctr9Q62018 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.07■□□□□ 0
Ctr9Q62018 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ctr9Q62018 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ctr9Q62018 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ctr9Q62018 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ctr9Q62018 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ctr9Q62018 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ctr9Q62018 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ctr9Q62018 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ctr9Q62018 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Gm13813-201ENSMUST00000120998 787 ntBASIC15.07■□□□□ 0
Ctr9Q62018 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.07■□□□□ 0
Ctr9Q62018 Gm2991-201ENSMUST00000173338 480 ntBASIC15.07■□□□□ 0
Ctr9Q62018 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.07■□□□□ 0
Ctr9Q62018 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.07■□□□□ 0
Ctr9Q62018 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Morn2-202ENSMUST00000227729 656 ntBASIC15.07■□□□□ 0
Ctr9Q62018 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.07■□□□□ 0
Ctr9Q62018 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ctr9Q62018 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.07■□□□□ 0
Ctr9Q62018 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ctr9Q62018 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ctr9Q62018 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ctr9Q62018 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ctr9Q62018 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms