Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccne1Q61457 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccne1Q61457 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccne1Q61457 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccne1Q61457 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccne1Q61457 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.56■□□□□ 0.24
Ccne1Q61457 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccne1Q61457 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccne1Q61457 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccne1Q61457 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccne1Q61457 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccne1Q61457 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccne1Q61457 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.55■□□□□ 0.24
Ccne1Q61457 Gm11331-201ENSMUST00000119764 288 ntBASIC16.55■□□□□ 0.24
Ccne1Q61457 Gm15703-201ENSMUST00000120250 880 ntBASIC16.55■□□□□ 0.24
Ccne1Q61457 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccne1Q61457 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccne1Q61457 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccne1Q61457 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccne1Q61457 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccne1Q61457 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.55■□□□□ 0.24
Ccne1Q61457 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccne1Q61457 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccne1Q61457 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccne1Q61457 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccne1Q61457 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.55■□□□□ 0.24
Ccne1Q61457 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccne1Q61457 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccne1Q61457 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccne1Q61457 Gm14263-201ENSMUST00000117955 746 ntBASIC16.54■□□□□ 0.24
Ccne1Q61457 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.54■□□□□ 0.24
Ccne1Q61457 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccne1Q61457 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccne1Q61457 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccne1Q61457 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ccne1Q61457 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccne1Q61457 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccne1Q61457 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Gm14644-201ENSMUST00000116671 647 ntBASIC16.53■□□□□ 0.24
Ccne1Q61457 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccne1Q61457 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccne1Q61457 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccne1Q61457 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.53■□□□□ 0.24
Ccne1Q61457 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccne1Q61457 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccne1Q61457 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccne1Q61457 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccne1Q61457 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccne1Q61457 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.52■□□□□ 0.24
Ccne1Q61457 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.52■□□□□ 0.24
Ccne1Q61457 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
Ccne1Q61457 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.52■□□□□ 0.24
Ccne1Q61457 Gm22334-201ENSMUST00000158070 133 ntBASIC16.52■□□□□ 0.24
Ccne1Q61457 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccne1Q61457 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.52■□□□□ 0.24
Ccne1Q61457 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.52■□□□□ 0.24
Ccne1Q61457 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccne1Q61457 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccne1Q61457 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.52■□□□□ 0.23
Ccne1Q61457 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccne1Q61457 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccne1Q61457 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccne1Q61457 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccne1Q61457 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccne1Q61457 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms