Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Six4Q61321 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.88□□□□□ -0.35
Six4Q61321 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Six4Q61321 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Six4Q61321 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.88□□□□□ -0.35
Six4Q61321 Gm27572-201ENSMUST00000183702 255 ntBASIC12.88□□□□□ -0.35
Six4Q61321 Gm38158-201ENSMUST00000194617 339 ntBASIC12.88□□□□□ -0.35
Six4Q61321 Gm43133-201ENSMUST00000197472 463 ntBASIC12.88□□□□□ -0.35
Six4Q61321 Gm45880-201ENSMUST00000213041 853 ntBASIC12.88□□□□□ -0.35
Six4Q61321 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Six4Q61321 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.88□□□□□ -0.35
Six4Q61321 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.88□□□□□ -0.35
Six4Q61321 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Daam2-202ENSMUST00000224595 1926 ntBASIC12.88□□□□□ -0.35
Six4Q61321 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.88□□□□□ -0.35
Six4Q61321 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Six4Q61321 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.88□□□□□ -0.35
Six4Q61321 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.87□□□□□ -0.35
Six4Q61321 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.87□□□□□ -0.35
Six4Q61321 Gm11964-201ENSMUST00000120982 444 ntBASIC12.87□□□□□ -0.35
Six4Q61321 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.87□□□□□ -0.35
Six4Q61321 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.87□□□□□ -0.35
Six4Q61321 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Six4Q61321 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Gm5781-201ENSMUST00000219792 443 ntBASIC12.87□□□□□ -0.35
Six4Q61321 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.87□□□□□ -0.35
Six4Q61321 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.87□□□□□ -0.35
Six4Q61321 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.87□□□□□ -0.35
Six4Q61321 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.87□□□□□ -0.35
Six4Q61321 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Six4Q61321 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.87□□□□□ -0.35
Six4Q61321 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Six4Q61321 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.86□□□□□ -0.35
Six4Q61321 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.86□□□□□ -0.35
Six4Q61321 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Gm24548-201ENSMUST00000158650 108 ntBASIC12.86□□□□□ -0.35
Six4Q61321 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Six4Q61321 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.86□□□□□ -0.35
Six4Q61321 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
Six4Q61321 Gm22058-201ENSMUST00000083393 310 ntBASIC12.86□□□□□ -0.35
Six4Q61321 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Six4Q61321 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Six4Q61321 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Six4Q61321 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Six4Q61321 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.86□□□□□ -0.35
Six4Q61321 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Six4Q61321 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms