Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.19□□□□□ -0.46
Nr1h4Q60641 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.19□□□□□ -0.46
Nr1h4Q60641 Gm15487-201ENSMUST00000122373 465 ntBASIC12.19□□□□□ -0.46
Nr1h4Q60641 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.19□□□□□ -0.46
Nr1h4Q60641 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.19□□□□□ -0.46
Nr1h4Q60641 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.19□□□□□ -0.46
Nr1h4Q60641 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.19□□□□□ -0.46
Nr1h4Q60641 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nr1h4Q60641 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Mir686-201ENSMUST00000102174 109 ntBASIC12.18□□□□□ -0.46
Nr1h4Q60641 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.18□□□□□ -0.46
Nr1h4Q60641 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.18□□□□□ -0.46
Nr1h4Q60641 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.18□□□□□ -0.46
Nr1h4Q60641 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.18□□□□□ -0.46
Nr1h4Q60641 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.18□□□□□ -0.46
Nr1h4Q60641 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Nr1h4Q60641 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nr1h4Q60641 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 174.5 ms