Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Gm16479-201ENSMUST00000121706 932 ntBASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Gm10012-201ENSMUST00000078252 192 ntBASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav5d-4Q5R1F6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm11814-201ENSMUST00000119515 929 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm13813-201ENSMUST00000120998 787 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm27839-201ENSMUST00000184242 106 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm27486-201ENSMUST00000184923 80 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav5d-4Q5R1F6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.96□□□□□ -0.65
Trav5d-4Q5R1F6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms