Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Gm12260-201ENSMUST00000122447 411 ntBASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 AC158529.1-201ENSMUST00000223618 239 ntBASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav3-3Q5R1C3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm6222-201ENSMUST00000120787 396 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Mir1895-201ENSMUST00000122615 79 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm29310-201ENSMUST00000185468 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21825-201ENSMUST00000185728 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm29109-201ENSMUST00000185895 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21896-201ENSMUST00000186520 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21873-201ENSMUST00000186728 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21794-201ENSMUST00000187056 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21880-201ENSMUST00000187275 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21826-201ENSMUST00000187451 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21198-201ENSMUST00000188393 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21749-201ENSMUST00000189343 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21901-201ENSMUST00000189568 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm29424-201ENSMUST00000189716 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm28599-201ENSMUST00000189838 694 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21867-201ENSMUST00000189917 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm29269-201ENSMUST00000190087 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21722-201ENSMUST00000190153 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm28423-201ENSMUST00000190701 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21899-201ENSMUST00000190745 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21910-201ENSMUST00000191163 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21849-201ENSMUST00000191571 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm28678-201ENSMUST00000191593 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm20910-201ENSMUST00000193268 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm21871-201ENSMUST00000194621 696 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm18049-201ENSMUST00000208909 581 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.57□□□□□ -0.88
Trav3-3Q5R1C3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms