Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.64□□□□□ -0.39
Tmed1Q3V009 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Gm13616-201ENSMUST00000120600 222 ntBASIC12.64□□□□□ -0.39
Tmed1Q3V009 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tmed1Q3V009 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm12403-201ENSMUST00000121384 959 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.63□□□□□ -0.39
Tmed1Q3V009 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.63□□□□□ -0.39
Tmed1Q3V009 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tmed1Q3V009 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tmed1Q3V009 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Tmed1Q3V009 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tmed1Q3V009 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tmed1Q3V009 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tmed1Q3V009 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms