Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Gm2260-201ENSMUST00000184965 657 ntBASIC15.19■□□□□ 0.02
Spg7Q3ULF4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg7Q3ULF4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gm24990-201ENSMUST00000157406 323 ntBASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gm16505-201ENSMUST00000179981 232 ntBASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gm44651-201ENSMUST00000207343 372 ntBASIC15.18■□□□□ 0.02
Spg7Q3ULF4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gm10076-201ENSMUST00000073238 384 ntBASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg7Q3ULF4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Gm13315-201ENSMUST00000120376 991 ntBASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Mir7070-201ENSMUST00000183657 86 ntBASIC15.17■□□□□ 0.02
Spg7Q3ULF4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Spg7Q3ULF4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms