Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Brf2Q3UAW9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Mir339-201ENSMUST00000083659 96 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Brf2Q3UAW9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Gm37042-201ENSMUST00000193816 581 ntBASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Gm8099-201ENSMUST00000200510 742 ntBASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms