Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col5a2Q3U962 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Col5a2Q3U962 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Gm8100-201ENSMUST00000182906 988 ntBASIC14.96□□□□□ -0.01
Col5a2Q3U962 Mir6998-201ENSMUST00000183343 64 ntBASIC14.96□□□□□ -0.01
Col5a2Q3U962 Mir8115-201ENSMUST00000184992 119 ntBASIC14.96□□□□□ -0.01
Col5a2Q3U962 Gm9132-201ENSMUST00000210182 832 ntBASIC14.96□□□□□ -0.01
Col5a2Q3U962 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Gm807-202ENSMUST00000224929 408 ntBASIC14.96□□□□□ -0.01
Col5a2Q3U962 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.96□□□□□ -0.01
Col5a2Q3U962 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col5a2Q3U962 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Col5a2Q3U962 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.96□□□□□ -0.02
Col5a2Q3U962 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.02
Col5a2Q3U962 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Gm24934-201ENSMUST00000103764 111 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Mir1956-201ENSMUST00000157748 65 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Gm25072-201ENSMUST00000175233 235 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Gm43184-201ENSMUST00000197247 542 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.95□□□□□ -0.02
Col5a2Q3U962 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col5a2Q3U962 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.94□□□□□ -0.02
Col5a2Q3U962 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Col5a2Q3U962 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.94□□□□□ -0.02
Col5a2Q3U962 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms